Publications
2017
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Bommer, M., Coates, L., Dau, H., Zouni, A., and Dobbek, H. (2017). Protein crystallization and initial neutron diffraction studies of the photosystem II subunit PsbO. Acta Crystallogr F Struct Biol Commun 73, 525-531.
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Bondar A.-N. and Smith J.C. (2017). Protonation-state coupled conformational dynamics in reaction mechanisms of channel and pump rhodopsins. Photochem Photobiol 93, 1336-1344.
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del Val, C. and Bondar, A.-N. (2017). Charged groups at binding interfaces of the PsbO subunit of photosystem II: a combined bioinformatics and simulation study. Biochim Biophys Acta (BBA) - Bioenergetics 1858, 432-441.
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Grimm, C., Vierock, J., Hegemann, P., and Wietek, J. (2017). Whole-cell Patch-clamp Recordings for Electrophysiological Determination of Ion Selectivity in Channelrhodopsins. JoVE 55497.
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Harris N.J., Reading E., Ataka K., Grzegorzewski L., Charalambous K., Liu X., Schlesinger R., Heberle J., and Booth P.J. (2017). Structure formation during translocon-unassisted co-translational membrane protein folding. Sci Rep 7: 8021.
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Helabad, M. B., Ghane, T., Reidelbach, M., Woelke, A. L., Knapp, E. W., and Imhof, P. (2017). Protonation-State-Dependent Communication in Cytochrome c Oxidase. Biophys J 113, 817-828.
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Hontani, Y., Broser, M., Silapetere, A., Krause, B. S., Hegemann, P., and Kennis, J. T. M. (2017). The femtosecond-to-second photochemistry of red-shifted fast-closing anion channelrhodopsin PsACR1. Phys Chem Chem Phys 19, 30402-30409.
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Kacprzak, S., Njimona, I., Renz, A., Feng, J., Reijerse, E., Lubitz, W., Krauss, N., Scheerer, P., Nagano, S., Lamparter, T., and Weber, S. (2017). Inter-subunit distances in full-length, dimeric, bacterial phytochrome Agp1, as measured by PELDOR between different spin label positions, remain unchanged upon photoconversion. J Biol Chem 292, 7598-7606.
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Kaufmann, J. C. D., Krause, B. S., Grimm, C., Ritter, E., Hegemann, P., Bartl, F.J. (2017). Proton transfer reactions in the red light-activatable channelrhodopsin variant ReaChR and their relevance for its function. J Biol Chem 292,14205-14216.
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Kielb, P., Utesch, T., Kozuch, J., Jeoung, J.-H., Dobbek, H., Mroginski, M.A., Hildebrandt, P., and Weidinger, I. (2017). Switchable Redox Chemistry of the Hexameric Tyrosine-Coordinated Heme Protein. J Phys Chem B 121, 3955-3964.
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Kottke, T., Lórenz-Fonfría V.A., and Heberle J. (2017). The Grateful Infrared – Sequential Protein Structural Changes Resolved by IR Difference Spectroscopy. J Phys Chem B 121, 335-350.
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Krause, B.S., Grimm, C., Kaufmann, J.C.D., Schneider, F., Sakmar, T.P., Bartl, F.J., and Hegemann, P. (2017). Complex Photochemistry within the Green-Absorbing Channelrhodopsin ReaChR. Biophys J 112, 1166-1175.
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Lamparter, T., Krauß, N., and Scheerer, P. (2017). Phytochromes from Agrobacterium fabrum. Photochem Photobiol 93, 642-655.
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Lorenz-Fonfria V.A., Saita M., Lazarova T., Schlesinger R., and Heberle J. (2017). pH-sensitive vibrational probe reveals a cytoplasmic protonated cluster in bacteriorhodopsin. Proc Natl Acad Sci 114, E10909-E10918.
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Mamatkulov, S. I., Allolio, C., Netz, R. R., and Bonthuis, D. J. (2017). Orientation-Induced Adsorption of Hydrated Protons at the Air-Water Interface. Angew Chem Int Ed Engl 56, 15846-15851.
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Oberthuer, D., Knoška, J., Wiedorn, M.O., Beyerlein, K.R., Bushnell, D.A-, Kovaleva, E.G., Heymann, M., Gumprecht, L., Kirian, R.A., Barty, A., Mariani, V., Tolstikova, A., Adriano, L., Awel, S., Barthelmess, M., Dörner, K., Xavier, P.L., Yefanov, O., James, D.R., Nelson, G., Wang, D., Calvey, G., Chen, Y., Schmidt, A., Szczepek, M., Frielingsdorf, S., Lenz, O., Snell, E., Robinson, P.J., Šarler, B., Belšak, G., Maček, M., Wilde, F., Aquila, A., Boutet, S., Liang, M., Hunter, M.S., Scheerer, P., Lipscomb, J.D., Weierstall, U., Kornberg, R.D., Spence, J.C., Pollack, L., Chapman, H.N., and Bajt, S. (2017). Double-flow focused liquid injector for efficient serial femtosecond crystallography. Sci Rep 7, 44628.
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Rossini, E., and Knapp, E. W. (2017). Protonation equilibria of transition metal complexes: from model systems toward the Mn complex in photosystem II. Coord. Chem. Rev. 345, 16-30.
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Schuth, N., Liang, Z., Schonborn, M., Kussicke, A., Assuncao, R., Zaharieva, I., Zilliges, Y., and Dau, H. (2017). Inhibitory and Non-Inhibitory NH3 Binding at the Water-Oxidizing Manganese Complex of Photosystem II Suggests Possible Sites and a Rearrangement Mode of Substrate Water Molecules. Biochemistry 56, 6240-6256.
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Sezer, M., Woelke, A.-L., Knapp, E.W., Schlesinger, R., Mroginski, M.A., and Weidinger, I.M. (2017). Redox induced protonation of heme propionates in cytochrome c oxidase: Insights from surface enhanced resonance Raman spectroscopy and QM/MM calculations. Biochim Biophys Acta (BBA) - Bioenergetics 1858, 103-108.
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Stensitzki, T., Yang, Y., Wölke, A.L., Knapp, E.-W., Hughes, J., Mroginski, M. A., and Heyne, K. (2017). Influence of Heterogeneity on the Ultrafast Photoisomerization Dynamics of Pfr in Cph1 Phytochrome. Photochem Photobiol 93, 703-712.
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Takiden, A., Velazquez-Escobar, F., Dragelj, J., Woelke, A.L., Knapp E.-W., Piwowarski, P., Bartl, F., Hildebrandt, P., and Mroginski, M.A. (2017). Structural and Vibrational Characterization of the Chromophore Binding Site of Bacterial Phytochrome Agp1. Photochem Photobiol 93, 713-723.
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Velázquez Escobar, F., Buhrke, D., Fernandez Lopez, M., Shenkutie, S.M., von Horsten., S, Essen, L.O., Hughes, J., and Hildebrandt, P. (2017). Structural communication between the chromophore-binding pocket and the N-terminal extension in plant phytochrome phyB. FEBS Lett 591, 1258-1265.
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Velázquez Escobar, F., Buhrke, D., Michael, N., Sauthof, L., Wilkening, S., Tavraz, N.N., Salewski, J., Frankenberg-Dinkel, N., Mroginski, M.A., Scheerer, P., Friedrich, T., Siebert, F., and Hildebrandt, P. (2017). Common Structural Elements in the Chromophore Binding Pocket of the Pfr State of Bathy Phytochromes. Photochem Photobiol 93, 724-732.
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Velazquez Escobar, F., Lang, C., Takiden, A., Schneider, C., Balke, J., Hughes, J., Alexiev, U., Hildebrandt, P., and Mroginski, M.A. (2017). Protonation-Dependent Structural Heterogeneity in the Chromophore Binding Site of Cyanobacterial Phytochrome Cph1. J Phys Chem B 121, 47-57.
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Wietek, J., Rodriguez-Rozada, S., Tutas, J., Tenedini, F., Grimm, C., Oertner, T. G., Soba, P., Hegemann, P., and Wiegert, J. S. (2017). Anion-conducting channelrhodopsins with tuned spectra and modified kinetics engineered for optogenetic manipulation of behavior. Sci. Rep. 7, 14957.
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Zhang, M., Bommer, M., Chatterjee, R., Hussein, R., Yano, J., Dau, H., Kern, J., Dobbek, H., and Zouni, A. (2017). Structural insights into the light-driven auto-assembly process of the water-oxidizing Mn4CaO5-cluster in photosystem II. eLife 6, DOI:10.7554/eLife.26933.